Gb_30972

Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 137.0)

Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_30972
Cluster	HCCA: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
Gb_02281	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.25	Archaeplastida
Gb_05896	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.03	Archaeplastida
Gb_09554	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.06	Archaeplastida
Gb_18762	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.04	Archaeplastida
Gb_19531	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.02	Archaeplastida
Gb_21502	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.04	Archaeplastida
Gb_21510	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_26446	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.04	Archaeplastida
Gb_30122	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.17	Archaeplastida
Gb_33342	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.03	Archaeplastida
Gb_33453	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.02	Archaeplastida
Gb_34528	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.02	Archaeplastida
Gb_36303	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.11	Archaeplastida
Gb_36546	No alias	Uncharacterized mitochondrial protein AtMg00860...	0.09	Archaeplastida
Gb_36965	No alias	no hits & (original description: none)	0.25	Archaeplastida
Gb_38708	No alias	Uncharacterized mitochondrial protein AtMg00860...	0.2	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	1436	1547

External Links

No external refs found!