Gb_30989

Description : effector receptor (NLR)

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0000221 (SeedPlants) Phylogenetic Tree(s): OG_06_0000221_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_30989
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00233110	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
AMTR_s00036p00213460	No alias	External stimuli response.biotic stress.pathogen...	0.02	Archaeplastida
AMTR_s00056p00218170	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.03	Archaeplastida
AMTR_s00154p00043260	No alias	No description available	0.03	Archaeplastida
AT1G69550	No alias	disease resistance protein (TIR-NBS-LRR class)	0.04	Archaeplastida
AT1G72890	No alias	Disease resistance protein (TIR-NBS class)	0.02	Archaeplastida
AT1G72910	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.04	Archaeplastida
AT1G72930	TIR	toll/interleukin-1 receptor-like	0.05	Archaeplastida
AT2G16870	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT3G04210	No alias	Disease resistance protein (TIR-NBS class)	0.03	Archaeplastida
AT4G11170	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Archaeplastida
AT4G16857	No alias	No description available	0.03	Archaeplastida
AT4G16880	No alias	Leucine-rich repeat (LRR) family protein	0.03	Archaeplastida
AT4G16920	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G11250	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.08	Archaeplastida
AT5G18350	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G46270	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G46450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G46470	RPS6	disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G46500	No alias	BEST Arabidopsis thaliana protein match is: disease...	0.05	Archaeplastida
AT5G46520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
GSVIVT01020123001	No alias	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
GSVIVT01020980001	No alias	External stimuli response.biotic stress.pathogen...	0.06	Archaeplastida
GSVIVT01020983001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01022982001	No alias	No description available	0.05	Archaeplastida
GSVIVT01026003001	No alias	External stimuli response.biotic stress.pathogen...	0.04	Archaeplastida
Gb_04264	No alias	effector receptor (NLR)	0.06	Archaeplastida
Gb_04748	No alias	effector receptor (NLR)	0.04	Archaeplastida
Gb_14946	No alias	effector receptor (NLR)	0.04	Archaeplastida
Gb_18066	No alias	effector receptor (NLR)	0.04	Archaeplastida
Gb_25646	No alias	effector receptor (NLR)	0.03	Archaeplastida
Gb_26523	No alias	effector receptor (NLR)	0.03	Archaeplastida
MA_10427441g0010	No alias	no description available(sp\|q9fl92\|rrs1b_arath : 91.7)	0.04	Archaeplastida
MA_10433845g0020	No alias	effector receptor (NLR)	0.03	Archaeplastida
Solyc04g007320.3.1	No alias	effector receptor (NLR)	0.04	Archaeplastida
Solyc07g052780.3.1	No alias	effector receptor (NLR)	0.03	Archaeplastida
Solyc07g055380.1.1	No alias	effector receptor (NLR)	0.02	Archaeplastida
Solyc12g097000.2.1	No alias	effector receptor (NLR)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	22	190
IPR002182	NB-ARC	203	433

External Links

No external refs found!

Gb_30989

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation