Description : Pectin lyase-like superfamily protein
Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0001044 (LandPlants) Phylogenetic Tree(s): OG_05_0001044_tree ,
OG_06_0000479 (SeedPlants) Phylogenetic Tree(s): OG_06_0000479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT2G43890 | |
Cluster | HCCA: Cluster_18 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00197210 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.06 | Archaeplastida | |
AMTR_s00066p00135670 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.03 | Archaeplastida | |
AT1G02460 | No alias | Pectin lyase-like superfamily protein | 0.08 | Archaeplastida | |
AT1G10640 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT1G60590 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT1G65570 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT3G07970 | QRT2 | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT3G26610 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
AT5G14650 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT5G39910 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT5G44830 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01013771001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01013800001 | No alias | Cell wall.pectin.modification and... | 0.04 | Archaeplastida | |
GSVIVT01017305001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01017644001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.07 | Archaeplastida | |
GSVIVT01028132001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01028189001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01032116001 | No alias | Polygalacturonase OS=Persea americana | 0.03 | Archaeplastida | |
GSVIVT01032117001 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
GSVIVT01032447001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
GSVIVT01033359001 | No alias | Cell wall.pectin.modification and... | 0.02 | Archaeplastida | |
GSVIVT01033364001 | No alias | Cell wall.pectin.modification and... | 0.04 | Archaeplastida | |
GSVIVT01038241001 | No alias | Polygalacturonase OS=Prunus persica | 0.04 | Archaeplastida | |
GSVIVT01038243001 | No alias | Polygalacturonase OS=Prunus persica | 0.03 | Archaeplastida | |
Gb_07779 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.03 | Archaeplastida | |
Gb_12018 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
LOC_Os01g19170.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os01g36830.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
LOC_Os01g43490.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
LOC_Os01g66710.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.02 | Archaeplastida | |
LOC_Os03g11760.1 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.03 | Archaeplastida | |
LOC_Os03g59330.1 | No alias | polygalacturonase (QRT2) | 0.04 | Archaeplastida | |
LOC_Os05g46510.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
LOC_Os05g46520.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.01 | Archaeplastida | |
LOC_Os05g50260.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
LOC_Os11g14410.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
MA_101764g0010 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_10431579g0010 | No alias | Polygalacturonase OS=Cryptomeria japonica... | 0.03 | Archaeplastida | |
MA_13282g0010 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.05 | Archaeplastida | |
MA_640601g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_9231294g0010 | No alias | No annotation | 0.03 | Archaeplastida | |
Mp3g10720.1 | No alias | Polygalacturonase OS=Chamaecyparis obtusa... | 0.02 | Archaeplastida | |
Mp3g21140.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Smo111266 | No alias | Polygalacturonase OS=Chamaecyparis obtusa | 0.03 | Archaeplastida | |
Smo78038 | No alias | Cell wall.pectin.modification and... | 0.04 | Archaeplastida | |
Solyc01g087280.2.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
Solyc02g067630.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
Solyc02g067640.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc04g008230.3.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
Solyc04g025440.3.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Solyc05g005040.4.1 | No alias | polygalacturonase (PGX1) | 0.03 | Archaeplastida | |
Solyc06g068040.3.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Solyc07g015870.4.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Solyc08g014540.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
Solyc08g014560.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.06 | Archaeplastida | |
Solyc12g009420.3.1 | No alias | Polygalacturonase QRT2 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc12g019120.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
Solyc12g019180.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.05 | Archaeplastida | |
Solyc12g019220.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.13 | Archaeplastida | |
Solyc12g019230.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.02 | Archaeplastida | |
Solyc12g096750.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Zm00001e006091_P001 | No alias | polygalacturonase (QRT2) | 0.01 | Archaeplastida | |
Zm00001e011814_P002 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.05 | Archaeplastida | |
Zm00001e026600_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e027720_P001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
Zm00001e032294_P001 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Zm00001e036989_P001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | ISS | Interproscan |
CC | GO:0005576 | extracellular region | ISM | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
MF | GO:0004033 | aldo-keto reductase (NADP) activity | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
MF | GO:0004737 | pyruvate decarboxylase activity | IEP | Neighborhood |
MF | GO:0005385 | zinc ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
BP | GO:0006820 | anion transport | IEP | Neighborhood |
BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
BP | GO:0006829 | zinc ion transport | IEP | Neighborhood |
BP | GO:0006869 | lipid transport | IEP | Neighborhood |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
MF | GO:0008142 | oxysterol binding | IEP | Neighborhood |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009267 | cellular response to starvation | IEP | Neighborhood |
BP | GO:0009733 | response to auxin | IEP | Neighborhood |
BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | Neighborhood |
BP | GO:0009741 | response to brassinosteroid | IEP | Neighborhood |
BP | GO:0009825 | multidimensional cell growth | IEP | Neighborhood |
BP | GO:0009828 | plant-type cell wall loosening | IEP | Neighborhood |
CC | GO:0009986 | cell surface | IEP | Neighborhood |
BP | GO:0009991 | response to extracellular stimulus | IEP | Neighborhood |
BP | GO:0010106 | cellular response to iron ion starvation | IEP | Neighborhood |
BP | GO:0010167 | response to nitrate | IEP | Neighborhood |
MF | GO:0010294 | abscisic acid glucosyltransferase activity | IEP | Neighborhood |
BP | GO:0010306 | rhamnogalacturonan II biosynthetic process | IEP | Neighborhood |
BP | GO:0010359 | regulation of anion channel activity | IEP | Neighborhood |
BP | GO:0010396 | rhamnogalacturonan II metabolic process | IEP | Neighborhood |
BP | GO:0014070 | response to organic cyclic compound | IEP | Neighborhood |
MF | GO:0015105 | arsenite transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015698 | inorganic anion transport | IEP | Neighborhood |
BP | GO:0015700 | arsenite transport | IEP | Neighborhood |
BP | GO:0015706 | nitrate transport | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Neighborhood |
BP | GO:0019852 | L-ascorbic acid metabolic process | IEP | Neighborhood |
BP | GO:0019853 | L-ascorbic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0022898 | regulation of transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
BP | GO:0031667 | response to nutrient levels | IEP | Neighborhood |
BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Neighborhood |
BP | GO:0031669 | cellular response to nutrient levels | IEP | Neighborhood |
BP | GO:0032409 | regulation of transporter activity | IEP | Neighborhood |
BP | GO:0032412 | regulation of ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0032879 | regulation of localization | IEP | Neighborhood |
MF | GO:0032934 | sterol binding | IEP | Neighborhood |
BP | GO:0034762 | regulation of transmembrane transport | IEP | Neighborhood |
BP | GO:0034765 | regulation of ion transmembrane transport | IEP | Neighborhood |
MF | GO:0035252 | UDP-xylosyltransferase activity | IEP | Neighborhood |
BP | GO:0040007 | growth | IEP | Neighborhood |
MF | GO:0042285 | xylosyltransferase activity | IEP | Neighborhood |
BP | GO:0042594 | response to starvation | IEP | Neighborhood |
BP | GO:0043090 | amino acid import | IEP | Neighborhood |
BP | GO:0043269 | regulation of ion transport | IEP | Neighborhood |
BP | GO:0044070 | regulation of anion transport | IEP | Neighborhood |
BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
MF | GO:0046910 | pectinesterase inhibitor activity | IEP | Neighborhood |
BP | GO:0048527 | lateral root development | IEP | Neighborhood |
BP | GO:0048528 | post-embryonic root development | IEP | Neighborhood |
BP | GO:0048589 | developmental growth | IEP | Neighborhood |
BP | GO:0048767 | root hair elongation | IEP | Neighborhood |
MF | GO:0050105 | L-gulonolactone oxidase activity | IEP | Neighborhood |
BP | GO:0051049 | regulation of transport | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0052325 | cell wall pectin biosynthetic process | IEP | Neighborhood |
BP | GO:0060560 | developmental growth involved in morphogenesis | IEP | Neighborhood |
BP | GO:0071496 | cellular response to external stimulus | IEP | Neighborhood |
BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
MF | GO:0072509 | divalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0090696 | post-embryonic plant organ development | IEP | Neighborhood |
BP | GO:1901698 | response to nitrogen compound | IEP | Neighborhood |
BP | GO:1903959 | regulation of anion transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 56 | 379 |
No external refs found! |