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  5. Gb_31111

Gb_31111


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 491.0)


Gene families : OG0002360 (Archaeplastida) Phylogenetic Tree(s): OG0002360_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31111
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_02613 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_35793 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
LOC_Os08g05750.1 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.03 Archaeplastida
MA_10431508g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_12023g0010 No alias RNA editing factor (MEF9) 0.11 Archaeplastida
MA_136498g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
MA_376862g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_68580g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_71420g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_858608g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Smo92492 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Zm00001e026664_P002 No alias RNA editing factor (BLX) 0.04 Archaeplastida
Zm00001e032581_P001 No alias RNA editing factor (BLX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 323 347
IPR032867 DYW_dom 421 545
IPR002885 Pentatricopeptide_repeat 146 194
IPR002885 Pentatricopeptide_repeat 248 294
No external refs found!