Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002431 (SeedPlants) Phylogenetic Tree(s): OG_06_0002431_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_31132 | |
Cluster | HCCA: Cluster_206 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00157690 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
AT1G19220 | ARF19, IAA22, ARF11 | auxin response factor 19 | 0.04 | Archaeplastida | |
AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.03 | Archaeplastida | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.03 | Archaeplastida | |
AT5G60450 | ARF4 | auxin response factor 4 | 0.05 | Archaeplastida | |
GSVIVT01023149001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01035204001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01035205001 | No alias | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
Gb_39685 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os02g35140.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os06g48950.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_69854g0010 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Smo404004 | No alias | No description available | 0.03 | Archaeplastida | |
Solyc01g103050.3.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc06g075150.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc11g069190.2.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc11g069500.2.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e012670_P001 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e030290_P005 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e041910_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006914 | autophagy | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Neighborhood |
CC | GO:1902911 | protein kinase complex | IEP | Neighborhood |
CC | GO:1990234 | transferase complex | IEP | Neighborhood |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Neighborhood |
No external refs found! |