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  5. Gb_31181

Gb_31181


Description : M-type thioredoxin


Gene families : OG0000516 (Archaeplastida) Phylogenetic Tree(s): OG0000516_tree ,
OG_05_0000996 (LandPlants) Phylogenetic Tree(s): OG_05_0000996_tree ,
OG_06_0001150 (SeedPlants) Phylogenetic Tree(s): OG_06_0001150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31181
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.04 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.07 Archaeplastida
AT1G43560 Aty2, ty2 thioredoxin Y2 0.04 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.09 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.05 Archaeplastida
AT4G03520 ATHM2 Thioredoxin superfamily protein 0.02 Archaeplastida
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.05 Archaeplastida
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.02 Archaeplastida
GSVIVT01034548001 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.08 Archaeplastida
LOC_Os04g57930.1 No alias X-type thioredoxin 0.03 Archaeplastida
LOC_Os12g08730.1 No alias M-type thioredoxin 0.05 Archaeplastida
MA_10433314g0010 No alias X-type thioredoxin 0.02 Archaeplastida
MA_474303g0010 No alias M-type thioredoxin 0.04 Archaeplastida
Mp3g04790.1 No alias X-type thioredoxin 0.06 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.1 Archaeplastida
Mp5g22220.1 No alias Y-type thioredoxin 0.02 Archaeplastida
Pp3c24_4980V3.1 No alias thioredoxin X 0.03 Archaeplastida
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.07 Archaeplastida
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.04 Archaeplastida
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.08 Archaeplastida
Pp3c6_10090V3.1 No alias thioredoxin M-type 1 0.02 Archaeplastida
Solyc01g008250.3.1 No alias X-type thioredoxin 0.1 Archaeplastida
Solyc04g071560.4.1 No alias Y-type thioredoxin 0.03 Archaeplastida
Solyc07g063190.3.1 No alias M-type thioredoxin 0.03 Archaeplastida
Solyc12g013810.2.1 No alias M-type thioredoxin 0.08 Archaeplastida
Zm00001e006545_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018385_P001 No alias M-type thioredoxin 0.03 Archaeplastida
Zm00001e018548_P001 No alias Y-type thioredoxin 0.04 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 82 182
No external refs found!