1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_31190

Gb_31190


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 533.0)


Gene families : OG0016275 (Archaeplastida) Phylogenetic Tree(s): OG0016275_tree ,
OG_05_0015817 (LandPlants) Phylogenetic Tree(s): OG_05_0015817_tree ,
OG_06_0015567 (SeedPlants) Phylogenetic Tree(s): OG_06_0015567_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31190
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Gb_24821 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Solyc04g064660.1.1 No alias Pentatricopeptide repeat-containing protein At3g21470... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 387 435
IPR002885 Pentatricopeptide_repeat 489 537
IPR002885 Pentatricopeptide_repeat 135 182
IPR002885 Pentatricopeptide_repeat 207 234
IPR002885 Pentatricopeptide_repeat 328 357
IPR002885 Pentatricopeptide_repeat 563 587
IPR002885 Pentatricopeptide_repeat 235 265
IPR002885 Pentatricopeptide_repeat 266 296
IPR002885 Pentatricopeptide_repeat 298 326
No external refs found!