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  5. Gb_31278

Gb_31278


Description : starch synthase (SSIV)


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0002023 (LandPlants) Phylogenetic Tree(s): OG_05_0002023_tree ,
OG_06_0007551 (SeedPlants) Phylogenetic Tree(s): OG_06_0007551_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31278
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cre04.g215150 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
Cre16.g663850 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
LOC_Os07g13880.1 No alias Soluble starch synthase 2-3, chloroplastic/amyloplastic... 0.02 Archaeplastida
MA_10429460g0010 No alias granule-bound starch (amylose) synthase 0.02 Archaeplastida
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.02 Archaeplastida
Zm00001e030868_P001 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e036589_P003 No alias granule-bound starch (amylose) synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 450 689
No external refs found!