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  5. Gb_31319

Gb_31319


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 622.0)


Gene families : OG0009648 (Archaeplastida) Phylogenetic Tree(s): OG0009648_tree ,
OG_05_0059788 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0052958 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31319
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_00639 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_08968 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_11036 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_10090072g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_318389g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 610 634
IPR002885 Pentatricopeptide_repeat 214 241
IPR002885 Pentatricopeptide_repeat 347 374
IPR002885 Pentatricopeptide_repeat 244 269
IPR032867 DYW_dom 709 833
IPR002885 Pentatricopeptide_repeat 434 481
IPR002885 Pentatricopeptide_repeat 271 319
IPR002885 Pentatricopeptide_repeat 536 584
IPR002885 Pentatricopeptide_repeat 401 431
No external refs found!