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  5. Gb_31523

Gb_31523


Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 931.0)


Gene families : OG0000543 (Archaeplastida) Phylogenetic Tree(s): OG0000543_tree ,
OG_05_0000407 (LandPlants) Phylogenetic Tree(s): OG_05_0000407_tree ,
OG_06_0000284 (SeedPlants) Phylogenetic Tree(s): OG_06_0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31523
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037259001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
LOC_Os05g01610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
MA_10435870g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida
Smo180358 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
Smo430894 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Solyc03g005590.2.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Solyc04g071040.4.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Zm00001e007456_P003 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.05 Archaeplastida
Zm00001e015467_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
Zm00001e023246_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 1061 1115
IPR027988 BRX_N 917 943
IPR000408 Reg_chr_condens 330 378
IPR000408 Reg_chr_condens 436 485
IPR000408 Reg_chr_condens 499 548
IPR000408 Reg_chr_condens 381 433
IPR000408 Reg_chr_condens 603 652
IPR001849 PH_domain 15 123
IPR000306 Znf_FYVE 663 722
No external refs found!