Gb_31623

Description : cyclic nucleotide-gated cation channel (CNGC)

Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0000523 (SeedPlants) Phylogenetic Tree(s): OG_06_0000523_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_31623
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00152360	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
AMTR_s00053p00015490	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.05	Archaeplastida
AT3G17700	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-binding transporter 1	0.02	Archaeplastida
AT5G57940	CNGC5, ATCNGC5	cyclic nucleotide gated channel 5	0.03	Archaeplastida
Cre01.g053700	No alias	Potassium channel SKOR OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01028711001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.04	Archaeplastida
GSVIVT01029404001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
GSVIVT01029407001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
LOC_Os02g54760.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os03g55100.1	No alias	cyclic nucleotide-gated cation channel (CNGC)....	0.02	Archaeplastida
LOC_Os04g55080.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os06g08850.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.06	Archaeplastida
LOC_Os06g33570.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
LOC_Os09g38580.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Pp3c3_20390V3.1	No alias	cyclic nucleotide-binding transporter 1	0.02	Archaeplastida
Solyc03g114110.4.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc07g005590.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc07g006510.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc08g069140.4.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc12g010010.2.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Zm00001e006772_P003	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Zm00001e015160_P001	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Zm00001e016088_P002	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Zm00001e030701_P001	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Zm00001e034885_P002	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Zm00001e036286_P001	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006914	autophagy	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008131	primary amine oxidase activity	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0048038	quinone binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Neighborhood
CC	GO:1902911	protein kinase complex	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood
CC	GO:1990316	Atg1/ULK1 kinase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	107	432
IPR000595	cNMP-bd_dom	527	616

External Links

No external refs found!

Gb_31623

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation