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  5. Gb_31652

Gb_31652


Description : subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0002865 (LandPlants) Phylogenetic Tree(s): OG_05_0002865_tree ,
OG_06_0003291 (SeedPlants) Phylogenetic Tree(s): OG_06_0003291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31652
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00128080 evm_27.TU.AmTr_v1... Putative multidrug resistance protein OS=Oryza sativa... 0.04 Archaeplastida
AMTR_s00145p00075460 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT2G39480 PGP6 P-glycoprotein 6 0.07 Archaeplastida
AT3G55320 PGP20 P-glycoprotein 20 0.02 Archaeplastida
LOC_Os01g74470.1 No alias subfamily ABCB transporter 0.07 Archaeplastida
LOC_Os03g17180.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_14136g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_40328g0010 No alias ABC transporter B family member 20 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g02910.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Mp2g06270.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Pp3c2_13930V3.1 No alias P-glycoprotein 20 0.02 Archaeplastida
Pp3c3_5680V3.1 No alias P-glycoprotein 10 0.03 Archaeplastida
Pp3c9_13390V3.1 No alias P-glycoprotein 6 0.02 Archaeplastida
Smo139408 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida
Solyc04g010310.4.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Zm00001e001258_P003 No alias subfamily ABCB transporter 0.05 Archaeplastida
Zm00001e018488_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e021746_P001 No alias ABC transporter B family member 2 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 423 568
IPR011527 ABC1_TM_dom 833 1098
IPR011527 ABC1_TM_dom 80 353
IPR003439 ABC_transporter-like 1169 1317
No external refs found!