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  5. Gb_31794

Gb_31794


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 686.0)


Gene families : OG0002360 (Archaeplastida) Phylogenetic Tree(s): OG0002360_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0052542 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31794
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G15690 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Gb_02613 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_13717 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_35793 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_10431508g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_12023g0010 No alias RNA editing factor (MEF9) 0.04 Archaeplastida
MA_136498g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
MA_141118g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_14659g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
MA_376862g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
MA_68580g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_858608g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Smo92492 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 700 824
IPR002885 Pentatricopeptide_repeat 426 473
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 162 205
IPR002885 Pentatricopeptide_repeat 294 340
IPR002885 Pentatricopeptide_repeat 53 100
IPR002885 Pentatricopeptide_repeat 237 259
IPR002885 Pentatricopeptide_repeat 604 625
IPR002885 Pentatricopeptide_repeat 105 128
IPR002885 Pentatricopeptide_repeat 371 394
IPR002885 Pentatricopeptide_repeat 133 161
No external refs found!