Gb_31795

Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 488.0)

Gene families : OG0011485 (Archaeplastida) Phylogenetic Tree(s): OG0011485_tree ,
OG_05_0007382 (LandPlants) Phylogenetic Tree(s): OG_05_0007382_tree ,
OG_06_0012889 (SeedPlants) Phylogenetic Tree(s): OG_06_0012889_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_31795
Cluster	HCCA: Cluster_231

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00006p00261060	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At3g49710...	0.03	Archaeplastida
MA_7379g0010	No alias	Putative pentatricopeptide repeat-containing protein...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	180	206
IPR002885	Pentatricopeptide_repeat	312	336
IPR032867	DYW_dom	713	764
IPR002885	Pentatricopeptide_repeat	236	284
IPR002885	Pentatricopeptide_repeat	338	385
IPR002885	Pentatricopeptide_repeat	438	486
IPR002885	Pentatricopeptide_repeat	539	586

External Links

No external refs found!