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  5. AT1G11320

AT1G11320


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0005025 (Archaeplastida) Phylogenetic Tree(s): OG0005025_tree ,
OG_05_0003837 (LandPlants) Phylogenetic Tree(s): OG_05_0003837_tree ,
OG_06_0004518 (SeedPlants) Phylogenetic Tree(s): OG_06_0004518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11320
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Gb_04163 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo442643 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009536 plastid IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007143 female meiotic nuclear division IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
BP GO:0010018 far-red light signaling pathway IEP Neighborhood
BP GO:0010496 intercellular transport IEP Neighborhood
BP GO:0016233 telomere capping IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042753 positive regulation of circadian rhythm IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0045947 negative regulation of translational initiation IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071490 cellular response to far red light IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090057 root radial pattern formation IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!