AT2G44940

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G44940
Cluster	HCCA: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00056p00064760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00068p00102110	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G25890	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G11140	CRF1	cytokinin response factor 1	0.06	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.05	Archaeplastida
Cre08.g364400	No alias	No description available	0.02	Archaeplastida
Cre14.g620500	No alias	No description available	0.02	Archaeplastida
Cre16.g661650	No alias	No description available	0.01	Archaeplastida
GSVIVT01005747001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013920001	No alias	No description available	0.05	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.04	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.07	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29168	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os02g42585.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46400.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g09390.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_115502g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c14_3280V3.1	No alias	cytokinin response factor 2	0.03	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.04	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015326_P001	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e015946_P001	No alias	no hits & (original description: none)	0.1	Archaeplastida
Zm00001e023149_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e035334_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
BP	GO:0008643	carbohydrate transport	IEP	Neighborhood
BP	GO:0008645	hexose transmembrane transport	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
CC	GO:0009705	plant-type vacuole membrane	IEP	Neighborhood
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009743	response to carbohydrate	IEP	Neighborhood
BP	GO:0009746	response to hexose	IEP	Neighborhood
BP	GO:0009750	response to fructose	IEP	Neighborhood
BP	GO:0009812	flavonoid metabolic process	IEP	Neighborhood
BP	GO:0009813	flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
BP	GO:0015749	monosaccharide transmembrane transport	IEP	Neighborhood
BP	GO:0015755	fructose transmembrane transport	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
BP	GO:0033231	carbohydrate export	IEP	Neighborhood
BP	GO:0034219	carbohydrate transmembrane transport	IEP	Neighborhood
BP	GO:0034284	response to monosaccharide	IEP	Neighborhood
BP	GO:0034486	vacuolar transmembrane transport	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0043425	bHLH transcription factor binding	IEP	Neighborhood
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055074	calcium ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1902334	fructose export from vacuole to cytoplasm	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	99	148

External Links

No external refs found!

AT2G44940

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation