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  5. Gb_32221

Gb_32221


Description : SMXL strigolactone signal transducer


Gene families : OG0001002 (Archaeplastida) Phylogenetic Tree(s): OG0001002_tree ,
OG_05_0000604 (LandPlants) Phylogenetic Tree(s): OG_05_0000604_tree ,
OG_06_0000858 (SeedPlants) Phylogenetic Tree(s): OG_06_0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32221
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.03 Archaeplastida
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.03 Archaeplastida
LOC_Os04g23220.1 No alias Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g06310.1 No alias SMXL strigolactone signal transducer 0.04 Archaeplastida
Solyc01g007260.3.1 No alias SMXL strigolactone signal transducer 0.04 Archaeplastida
Zm00001e008174_P001 No alias SMXL strigolactone signal transducer 0.04 Archaeplastida
Zm00001e008462_P001 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Zm00001e014536_P001 No alias Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e040671_P002 No alias SMXL strigolactone signal transducer 0.06 Archaeplastida
Zm00001e040845_P001 No alias SMXL strigolactone signal transducer 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!