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  5. Gb_32311

Gb_32311


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 598.0)


Gene families : OG0000874 (Archaeplastida) Phylogenetic Tree(s): OG0000874_tree ,
OG_05_0000126 (LandPlants) Phylogenetic Tree(s): OG_05_0000126_tree ,
OG_06_0000049 (SeedPlants) Phylogenetic Tree(s): OG_06_0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32311
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Gb_00103 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_01791 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_03738 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_03910 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_04010 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_06979 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_07892 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_08813 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_10588 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.23 Archaeplastida
Gb_10984 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_13579 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_14301 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_19407 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_20680 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_24463 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_24932 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_25674 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_26742 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 Archaeplastida
Gb_29931 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_32236 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_33563 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_34518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.19 Archaeplastida
Gb_35549 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_35937 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_36149 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!