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  5. Gb_32393

Gb_32393


Description : EARP-specific component Syndetin-like of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes


Gene families : OG0003710 (Archaeplastida) Phylogenetic Tree(s): OG0003710_tree ,
OG_05_0005205 (LandPlants) Phylogenetic Tree(s): OG_05_0005205_tree ,
OG_06_0007006 (SeedPlants) Phylogenetic Tree(s): OG_06_0007006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32393
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00082p00164590 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 Archaeplastida
Cpa|evm.model.tig00020912.37 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.01 Archaeplastida
GSVIVT01031444001 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.06 Archaeplastida
Mp1g19170.1 No alias EARP-specific component Syndetin-like of GARP/EARP... 0.02 Archaeplastida
Pp3c16_8720V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c5_16860V3.1 No alias No annotation 0.02 Archaeplastida
Smo440658 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.03 Archaeplastida
Zm00001e002270_P001 No alias EARP-specific component Syndetin-like of GARP/EARP... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019515 VPS54_N 1 121
IPR019514 DUF2451_C 665 896
No external refs found!