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Gb_32432


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 535.0)


Gene families : OG0012195 (Archaeplastida) Phylogenetic Tree(s): OG0012195_tree ,
OG_05_0017487 (LandPlants) Phylogenetic Tree(s): OG_05_0017487_tree ,
OG_06_0020042 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32432
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Gb_02413 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_135501g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 711 732
IPR002885 Pentatricopeptide_repeat 774 803
IPR002885 Pentatricopeptide_repeat 512 531
IPR002885 Pentatricopeptide_repeat 74 99
IPR002885 Pentatricopeptide_repeat 406 431
IPR002885 Pentatricopeptide_repeat 305 330
IPR032867 DYW_dom 807 856
IPR002885 Pentatricopeptide_repeat 634 681
IPR002885 Pentatricopeptide_repeat 533 580
IPR002885 Pentatricopeptide_repeat 230 277
IPR002885 Pentatricopeptide_repeat 432 479
IPR002885 Pentatricopeptide_repeat 168 200
IPR002885 Pentatricopeptide_repeat 331 378
No external refs found!