Gb_32451

Description : Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana (sp|q9m1v3|pp296_arath : 529.0)

Gene families : OG0013345 (Archaeplastida) Phylogenetic Tree(s): OG0013345_tree ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0014228 (SeedPlants) Phylogenetic Tree(s): OG_06_0014228_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_32451
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method
Gb_21057	No alias	Pentatricopeptide repeat-containing protein DOT4,...	0.07	Archaeplastida
Gb_30942	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.05	Archaeplastida
MA_465411g0010	No alias	Pentatricopeptide repeat-containing protein At1g11290,...	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	311	337
IPR002885	Pentatricopeptide_repeat	676	701
IPR002885	Pentatricopeptide_repeat	110	135
IPR002885	Pentatricopeptide_repeat	414	437
IPR002885	Pentatricopeptide_repeat	211	236
IPR002885	Pentatricopeptide_repeat	441	467
IPR002885	Pentatricopeptide_repeat	602	650
IPR002885	Pentatricopeptide_repeat	237	284
IPR002885	Pentatricopeptide_repeat	338	385
IPR002885	Pentatricopeptide_repeat	501	548
IPR002885	Pentatricopeptide_repeat	136	183

External Links

No external refs found!