Gb_32475

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 500.0)

Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0001276 (LandPlants) Phylogenetic Tree(s): OG_05_0001276_tree ,
OG_06_0000902 (SeedPlants) Phylogenetic Tree(s): OG_06_0000902_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_32475
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_956160g0010	No alias	Pentatricopeptide repeat-containing protein At3g02330,...	0.09	Archaeplastida
Zm00001e010701_P001	No alias	Pentatricopeptide repeat-containing protein At1g26460,...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	523	628
IPR002885	Pentatricopeptide_repeat	425	448
IPR002885	Pentatricopeptide_repeat	324	349
IPR002885	Pentatricopeptide_repeat	148	195
IPR002885	Pentatricopeptide_repeat	350	397
IPR002885	Pentatricopeptide_repeat	249	296

External Links

No external refs found!