Gb_32703

Description : transcription factor (SBP)

Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0057123 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_32703
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01021087001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.05	Archaeplastida
Gb_03922	No alias	transcription factor (SBP)	0.04	Archaeplastida
LOC_Os02g04680.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
LOC_Os08g41940.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
MA_15381g0010	No alias	transcription factor (SBP)	0.03	Archaeplastida
MA_22749g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_383231g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp1g10020.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
Mp1g10030.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e003546_P002	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e013795_P002	No alias	transcription factor (SBP)	0.04	Archaeplastida
Zm00001e025110_P001	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e025234_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e030416_P001	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e034537_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009733	response to auxin	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	238	311

External Links

No external refs found!