AT2G45520


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).


Gene families : OG0007023 (Archaeplastida) Phylogenetic Tree(s): OG0007023_tree ,
OG_05_0005459 (LandPlants) Phylogenetic Tree(s): OG_05_0005459_tree ,
OG_06_0006589 (SeedPlants) Phylogenetic Tree(s): OG_06_0006589_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G45520
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
MA_9912084g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036614_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005665 RNA polymerase II, core complex IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0007276 gamete generation IEP Neighborhood
BP GO:0007292 female gamete generation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010074 maintenance of meristem identity IEP Neighborhood
BP GO:0010078 maintenance of root meristem identity IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0035266 meristem growth IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Neighborhood
BP GO:0048232 male gamete generation IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
MF GO:0051192 prosthetic group binding IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!