Gb_32793


Description : OTP51 plastidial RNA splicing factor


Gene families : OG0007260 (Archaeplastida) Phylogenetic Tree(s): OG0007260_tree ,
OG_05_0006849 (LandPlants) Phylogenetic Tree(s): OG_05_0006849_tree ,
OG_06_0008359 (SeedPlants) Phylogenetic Tree(s): OG_06_0008359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32793
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT2G15820 OTP51 endonucleases 0.04 Archaeplastida
LOC_Os02g47360.1 No alias OTP51 plastidial RNA splicing factor 0.04 Archaeplastida
Smo438810 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
Solyc11g066850.3.1 No alias OTP51 plastidial RNA splicing factor 0.04 Archaeplastida
Zm00001e015566_P003 No alias OTP51 plastidial RNA splicing factor 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR004860 LAGLIDADG_2 287 450
IPR033443 PPR_long 52 163
No external refs found!