Gb_32913

Description : Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana (sp|q9liq7|pp252_arath : 486.0)

Gene families : OG0012883 (Archaeplastida) Phylogenetic Tree(s): OG0012883_tree ,
OG_05_0012816 (LandPlants) Phylogenetic Tree(s): OG_05_0012816_tree ,
OG_06_0012813 (SeedPlants) Phylogenetic Tree(s): OG_06_0012813_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_32913
Cluster	HCCA: Cluster_300

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00259690	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At5g46460,...	0.02	Archaeplastida
AT1G32415	No alias	pentatricopeptide (PPR) repeat-containing protein	0.04	Archaeplastida
MA_20585g0020	No alias	Pentatricopeptide repeat-containing protein At4g02750...	0.03	Archaeplastida
MA_935573g0010	No alias	Pentatricopeptide repeat-containing protein At4g33170...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	338	385
IPR002885	Pentatricopeptide_repeat	123	169
IPR002885	Pentatricopeptide_repeat	243	284
IPR002885	Pentatricopeptide_repeat	205	227
IPR002885	Pentatricopeptide_repeat	177	203
IPR032867	DYW_dom	511	635

External Links

No external refs found!