Gb_33057

Description : subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0029267 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027743 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_33057
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.08	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AMTR_s00045p00109940	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT1G02530	PGP12	P-glycoprotein 12	0.03	Archaeplastida
AT1G27940	PGP13	P-glycoprotein 13	0.02	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.04	Archaeplastida
AT3G28415	No alias	ABC transporter family protein	0.03	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.03	Archaeplastida
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.05	Archaeplastida
AT4G01830	PGP5	P-glycoprotein 5	0.04	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.07	Archaeplastida
GSVIVT01013125001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01032578001	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
Gb_02468	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Gb_02469	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Gb_08616	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Gb_08706	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_10211	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_18150	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	Archaeplastida
Gb_36497	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_36862	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os01g35030.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50160.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os02g09720.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g21750.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.02	Archaeplastida
LOC_Os08g45030.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_10436810g0020	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_107576g0010	No alias	subfamily ABCB transporter	0.05	Archaeplastida
MA_111099g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_560534g0010	No alias	No annotation	0.03	Archaeplastida
MA_6870g0010	No alias	subfamily ABCB transporter	0.06	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	Archaeplastida
MA_83806g0010	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_93218g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Mp1g26440.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Mp3g11830.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Pp3c1_31680V3.1	No alias	ABC transporter family protein	0.01	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.06	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c21_18190V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Smo123915	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo123936	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo169182	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo176522	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Smo233433	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo410515	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo419451	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo74892	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo92485	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc03g093650.3.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Solyc05g013890.3.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.09	Archaeplastida
Solyc06g009290.4.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Solyc07g064120.2.1	No alias	subfamily ABCB transporter	0.01	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
Solyc12g098840.3.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Zm00001e019933_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e020070_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e028117_P001	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Zm00001e041008_P003	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006013	mannose metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	1028	1177
IPR003439	ABC_transporter-like	381	530
IPR011527	ABC1_TM_dom	691	959
IPR011527	ABC1_TM_dom	37	308

External Links

No external refs found!

Gb_33057

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation