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  5. Gb_33134

Gb_33134


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 608.0)


Gene families : OG0009648 (Archaeplastida) Phylogenetic Tree(s): OG0009648_tree ,
OG_05_0056850 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049794 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33134
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_08968 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_11036 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_21046 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida
MA_10090072g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_318389g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 215 241
IPR002885 Pentatricopeptide_repeat 509 533
IPR002885 Pentatricopeptide_repeat 243 270
IPR002885 Pentatricopeptide_repeat 299 331
IPR002885 Pentatricopeptide_repeat 334 381
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 435 483
IPR032867 DYW_dom 608 732
No external refs found!