- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (bHLH). transcriptional regulator (CIB)
Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0000169 (SeedPlants) Phylogenetic Tree(s): OG_06_0000169_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_33185 | |
| Cluster | HCCA: Cluster_87 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G03040 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT1G10120 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT2G42280 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT5G48560 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G58010 | LRL3 | LJRHL1-like 3 | 0.03 | Archaeplastida | |
| GSVIVT01010126001 | No alias | External stimuli response.light.UV-A/blue... | 0.02 | Archaeplastida | |
| GSVIVT01023585001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Gb_12493 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Gb_40829 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| LOC_Os01g68700.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os02g55250.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os03g58830.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os08g41320.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| MA_42080g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Mp6g18480.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Mpzg01410.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Pp3c14_24020V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Smo93546 | No alias | External stimuli response.light.UV-A/blue... | 0.04 | Archaeplastida | |
| Solyc12g098620.2.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| Zm00001e009823_P002 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e011410_P001 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Zm00001e012110_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Zm00001e015045_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e021418_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e023327_P001 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Zm00001e036318_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Neighborhood |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006534 | cysteine metabolic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009092 | homoserine metabolic process | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019346 | transsulfuration | IEP | Neighborhood |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 179 | 226 |
| No external refs found! |