Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 108.0)
Gene families : OG0000364 (Archaeplastida) Phylogenetic Tree(s): OG0000364_tree ,
OG_05_0000134 (LandPlants) Phylogenetic Tree(s): OG_05_0000134_tree ,
OG_06_0000108 (SeedPlants) Phylogenetic Tree(s): OG_06_0000108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_33414 | |
Cluster | HCCA: Cluster_301 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_00288 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Gb_00434 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
Gb_01729 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Gb_05523 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_06034 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Gb_06223 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Gb_06978 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_08095 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_08402 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Gb_08666 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_09514 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_10464 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
Gb_13443 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_15820 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Gb_20081 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_21118 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Gb_24597 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_25995 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_26878 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
Gb_27666 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Gb_27945 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Gb_28242 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_29350 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
Gb_29546 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_29919 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Gb_30261 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Gb_30317 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_33182 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_33497 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Gb_33583 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Gb_36579 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_37666 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Gb_38048 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Gb_39221 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_39395 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
Gb_40384 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
Gb_40566 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_40853 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_41697 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
CC | GO:0008290 | F-actin capping protein complex | IEP | Neighborhood |
BP | GO:0010639 | negative regulation of organelle organization | IEP | Neighborhood |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0030834 | regulation of actin filament depolymerization | IEP | Neighborhood |
BP | GO:0030835 | negative regulation of actin filament depolymerization | IEP | Neighborhood |
BP | GO:0030837 | negative regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0031333 | negative regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032272 | negative regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
BP | GO:0043242 | negative regulation of protein complex disassembly | IEP | Neighborhood |
BP | GO:0043244 | regulation of protein complex disassembly | IEP | Neighborhood |
BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0051016 | barbed-end actin filament capping | IEP | Neighborhood |
BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051129 | negative regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0051494 | negative regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0051693 | actin filament capping | IEP | Neighborhood |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
BP | GO:1901879 | regulation of protein depolymerization | IEP | Neighborhood |
BP | GO:1901880 | negative regulation of protein depolymerization | IEP | Neighborhood |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
BP | GO:1902904 | negative regulation of supramolecular fiber organization | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001584 | Integrase_cat-core | 10 | 60 |
No external refs found! |