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  5. Gb_33463

Gb_33463


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 135.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33463

Target Alias Description ECC score Gene Family Method Actions
Gb_03960 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_04560 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_11519 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.2 Archaeplastida
Gb_12173 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_12881 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.12 Archaeplastida
Gb_14590 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_15353 No alias no hits & (original description: none) 0.33 Archaeplastida
Gb_17315 No alias Uncharacterized mitochondrial protein AtMg00860... 0.17 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_18710 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_21502 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_21510 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_23067 No alias no hits & (original description: none) 0.2 Archaeplastida
Gb_23709 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.14 Archaeplastida
Gb_26446 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_30875 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_30891 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.2 Archaeplastida
Gb_32988 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_33342 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_33453 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_34528 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_35936 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.2 Archaeplastida
Gb_36546 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_38589 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000477 RT_dom 1010 1170
IPR001584 Integrase_cat-core 1450 1563
IPR005162 Retrotrans_gag_dom 543 631
No external refs found!