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  5. Gb_33498

Gb_33498


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 205.0)


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33498
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01009612001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_03640 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_19215 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_25706 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_33493 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.12 Archaeplastida
MA_10431396g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_28858g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_710617g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c11_2770V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Archaeplastida
Solyc01g068250.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g005020.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g044320.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e012074_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 104 133
IPR001680 WD40_repeat 139 174
IPR001680 WD40_repeat 188 220
No external refs found!