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  5. Gb_33808

Gb_33808


Description : uridylyltransferase (URT1)


Gene families : OG0004589 (Archaeplastida) Phylogenetic Tree(s): OG0004589_tree ,
OG_05_0004848 (LandPlants) Phylogenetic Tree(s): OG_05_0004848_tree ,
OG_06_0005026 (SeedPlants) Phylogenetic Tree(s): OG_06_0005026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33808
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020538.9 No alias RNA processing.RNA modification.uridylation.URT1... 0.01 Archaeplastida
GSVIVT01027570001 No alias RNA processing.RNA modification.uridylation.URT1... 0.03 Archaeplastida
MA_10436236g0010 No alias UTP:RNA uridylyltransferase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp8g15550.1 No alias uridylyltransferase (URT1) 0.02 Archaeplastida
Smo100054 No alias RNA processing.RNA modification.uridylation.URT1... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002058 PAP_assoc 1039 1098
No external refs found!