Gb_33852


Description : exoribonuclease (RNase R)


Gene families : OG0005570 (Archaeplastida) Phylogenetic Tree(s): OG0005570_tree ,
OG_05_0061094 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0054388 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33852
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034161001 No alias RNA processing.organelle machineries.ribonuclease... 0.08 Archaeplastida
LOC_Os01g62440.1 No alias exoribonuclease (RNase R) 0.05 Archaeplastida
MA_10437077g0010 No alias exoribonuclease (RNase R) 0.07 Archaeplastida
Mp3g07060.1 No alias exoribonuclease (RNase R) 0.04 Archaeplastida
Pp3c14_20610V3.1 No alias Ribonuclease II/R family protein 0.06 Archaeplastida
Smo145357 No alias RNA processing.organelle machineries.ribonuclease... 0.05 Archaeplastida
Solyc09g010870.4.1 No alias exoribonuclease (RNase R) 0.04 Archaeplastida
Zm00001e019318_P002 No alias exoribonuclease (RNase R) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!