- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : exoribonuclease (RNase R)
Gene families : OG0005570 (Archaeplastida) Phylogenetic Tree(s): OG0005570_tree ,
OG_05_0061094 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0054388 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_33852 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01034161001 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.08 | Archaeplastida | |
| LOC_Os01g62440.1 | No alias | exoribonuclease (RNase R) | 0.05 | Archaeplastida | |
| MA_10437077g0010 | No alias | exoribonuclease (RNase R) | 0.07 | Archaeplastida | |
| Mp3g07060.1 | No alias | exoribonuclease (RNase R) | 0.04 | Archaeplastida | |
| Pp3c14_20610V3.1 | No alias | Ribonuclease II/R family protein | 0.06 | Archaeplastida | |
| Smo145357 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.05 | Archaeplastida | |
| Solyc09g010870.4.1 | No alias | exoribonuclease (RNase R) | 0.04 | Archaeplastida | |
| Zm00001e019318_P002 | No alias | exoribonuclease (RNase R) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| BP | GO:0006415 | translational termination | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
| BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Neighborhood |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| MF | GO:0050497 | transferase activity, transferring alkylthio groups | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |