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  5. Gb_34229

Gb_34229


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34229
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
AT3G27010 AT-TCP20, TCP20,... TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.03 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.04 Archaeplastida
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
LOC_Os11g07460.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Pp3c3_24450V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Archaeplastida
Solyc05g007420.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e023897_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e024509_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e030854_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 143 263
No external refs found!