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  5. Gb_34528

Gb_34528


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 140.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34528
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.12 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
ChrSy.fgenesh.mRNA.34 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.38 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_00235 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_01711 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_02281 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_09686 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_11519 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Gb_12173 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_12881 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_13328 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_14507 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_15353 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_18721 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_23067 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_23550 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_23709 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_27104 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_27519 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28570 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_30122 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_30475 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_30972 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_33463 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_35176 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35936 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_36033 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_36303 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_36546 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_36965 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_38300 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_38589 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.01 Archaeplastida
Gb_39593 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_40970 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!