1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G47550

AT2G47550


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0008035 (SeedPlants) Phylogenetic Tree(s): OG_06_0008035_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G47550
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00033080 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00074780 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.04 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.04 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.04 Archaeplastida
Gb_24564 No alias pectin methylesterase 0.04 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os01g57854.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os08g12410.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os08g34900.1 No alias pectin methylesterase 0.06 Archaeplastida
MA_10434786g0010 No alias No annotation 0.02 Archaeplastida
MA_130858g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.05 Archaeplastida
Mp6g15150.1 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc11g005770.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.07 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015171 amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015809 arginine transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019218 regulation of steroid metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
MF GO:0033612 receptor serine/threonine kinase binding IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
BP GO:0042754 negative regulation of circadian rhythm IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0050810 regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 246 543
IPR006501 Pectinesterase_inhib_dom 36 179
No external refs found!