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Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 148.0)
Gene families : OG0000233 (Archaeplastida) Phylogenetic Tree(s): OG0000233_tree ,
OG_05_0000415 (LandPlants) Phylogenetic Tree(s): OG_05_0000415_tree ,
OG_06_0000490 (SeedPlants) Phylogenetic Tree(s): OG_06_0000490_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_35079 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00200350 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
| AMTR_s00067p00185510 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| GSVIVT01012784001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| GSVIVT01028394001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| LOC_Os10g33230.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | Archaeplastida | |
| MA_10432683g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | Archaeplastida | |
| MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | Archaeplastida | |
| MA_141102g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| MA_473g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| MA_79622g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | Archaeplastida | |
| MA_93349g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Pp3c26_10420V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| Solyc03g005680.3.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Solyc03g121710.2.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Solyc07g045240.3.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | Archaeplastida | |
| Solyc09g090520.3.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Zm00001e002844_P001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Zm00001e004612_P001 | No alias | no hits & (original description: none) | 0.1 | Archaeplastida | |
| Zm00001e012709_P005 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | Archaeplastida | |
| Zm00001e014461_P003 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.06 | Archaeplastida | |
| Zm00001e030652_P001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Neighborhood |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| No external refs found! |