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  5. Gb_35107

Gb_35107


Description : Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana (sp|q9c5x4|atx1_arath : 133.0)


Gene families : OG0004479 (Archaeplastida) Phylogenetic Tree(s): OG0004479_tree ,
OG_05_0004689 (LandPlants) Phylogenetic Tree(s): OG_05_0004689_tree ,
OG_06_0004089 (SeedPlants) Phylogenetic Tree(s): OG_06_0004089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35107
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00060580 evm_27.TU.AmTr_v1... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G77800 No alias PHD finger family protein 0.02 Archaeplastida
Cre09.g395584 No alias No description available 0.02 Archaeplastida
GSVIVT01008944001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os02g52960.1 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os06g10690.1 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.02 Archaeplastida
MA_10435451g0030 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 Archaeplastida
Smo407186 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc11g013530.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!