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  5. Gb_35447

Gb_35447


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0065210 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0058822 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35447
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00058p00210070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_83624g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c15_3180V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Solyc05g054510.2.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc11g010940.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 191 246
No external refs found!