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  5. AT1G11620

AT1G11620


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11620
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.09 Archaeplastida
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G31510 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G32140 No alias F-box family protein 0.17 Archaeplastida
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.07 Archaeplastida
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.12 Archaeplastida
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT2G39355 No alias No description available 0.04 Archaeplastida
AT3G03405 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G16020 No alias F-box associated ubiquitination effector protein 0.02 Archaeplastida
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G17490 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.16 Archaeplastida
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.16 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G17620 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G18330 No alias F-box family protein 0.08 Archaeplastida
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G19560 No alias F-box family protein 0.2 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G20710 No alias F-box family protein 0.05 Archaeplastida
AT3G21165 No alias No description available 0.08 Archaeplastida
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G25460 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.16 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.16 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.16 Archaeplastida
AT5G51000 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 5 46
IPR006527 F-box-assoc_dom_typ1 202 338
No external refs found!