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  5. Gb_35769

Gb_35769


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 126.0)


Gene families : OG0008443 (Archaeplastida) Phylogenetic Tree(s): OG0008443_tree ,
OG_05_0007434 (LandPlants) Phylogenetic Tree(s): OG_05_0007434_tree ,
OG_06_0004663 (SeedPlants) Phylogenetic Tree(s): OG_06_0004663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35769

Target Alias Description ECC score Gene Family Method Actions
Gb_07186 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_22293 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_24847 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Gb_37776 No alias no hits & (original description: none) 0.17 Archaeplastida
Gb_39609 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Gb_41336 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Pp3c12_2180V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004820 glycine-tRNA ligase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006426 glycyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!