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  5. Gb_35797

Gb_35797


Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia (sp|q94kl7|sild_forin : 222.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0010651 (LandPlants) Phylogenetic Tree(s): OG_05_0010651_tree ,
OG_06_0010331 (SeedPlants) Phylogenetic Tree(s): OG_06_0010331_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35797
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030245001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01036069001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_00716 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_03813 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g10000.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g10010.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os07g46846.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g46870.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
MA_932914g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc01g005500.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Zm00001e008253_P002 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e021516_P001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!