Description : tRNA pseudouridine synthase (TruA)
Gene families : OG0007363 (Archaeplastida) Phylogenetic Tree(s): OG0007363_tree ,
OG_05_0009646 (LandPlants) Phylogenetic Tree(s): OG_05_0009646_tree ,
OG_06_0011333 (SeedPlants) Phylogenetic Tree(s): OG_06_0011333_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_36006 | |
Cluster | HCCA: Cluster_166 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre09.g405150 | No alias | Enzyme classification.EC_5 isomerases.EC_5.4... | 0.01 | Archaeplastida | |
Cre13.g591501 | No alias | RNA processing.RNA... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Neighborhood |
BP | GO:0006570 | tyrosine metabolic process | IEP | Neighborhood |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Neighborhood |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020097 | PsdUridine_synth_TruA_a/b_dom | 237 | 296 |
No external refs found! |