Description : pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0001525 (LandPlants) Phylogenetic Tree(s): OG_05_0001525_tree ,
OG_06_0001343 (SeedPlants) Phylogenetic Tree(s): OG_06_0001343_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_36012 | |
Cluster | HCCA: Cluster_143 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00074780 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.04 | Archaeplastida | |
AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT2G43050 | ATPMEPCRD | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT3G05610 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT3G49220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.06 | Archaeplastida | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT5G27870 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.06 | Archaeplastida | |
GSVIVT01016667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01017687001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028265001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01031165001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01031667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os04g38560.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os07g49100.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os08g34900.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os08g34910.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os09g26360.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_10434786g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
MA_2017g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c18_22120V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Solyc01g066360.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc01g066390.4.1 | No alias | Probable pectinesterase/pectinesterase inhibitor 58... | 0.04 | Archaeplastida | |
Solyc01g066420.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc01g099940.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083360.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g123620.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc03g123630.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc07g017560.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc07g064190.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc12g099410.2.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e004056_P002 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Zm00001e014142_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e017515_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e034231_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e041006_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
MF | GO:0043531 | ADP binding | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No external refs found! |