Gb_36048

Description : EXO9-SUPERKILLER interaction factor (SKI7). GTPase component HBS1/SPL33 of DOM34-HBS1 aberrant mRNA detection complex

Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0003968 (LandPlants) Phylogenetic Tree(s): OG_05_0003968_tree ,
OG_06_0003764 (SeedPlants) Phylogenetic Tree(s): OG_06_0003764_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_36048
Cluster	HCCA: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00021352.57	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.03	Archaeplastida
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000795	TF_GTP-bd_dom	245	441
IPR004160	Transl_elong_EFTu/EF1A_C	566	671
IPR001876	Znf_RanBP2	104	129
IPR001876	Znf_RanBP2	51	76

External Links

No external refs found!