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  5. Gb_36142

Gb_36142


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 569.0)


Gene families : OG0011413 (Archaeplastida) Phylogenetic Tree(s): OG0011413_tree ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36142
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Gb_07756 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.11 Archaeplastida
MA_297123g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 446 474
IPR002885 Pentatricopeptide_repeat 346 393
IPR002885 Pentatricopeptide_repeat 578 627
IPR002885 Pentatricopeptide_repeat 151 199
IPR002885 Pentatricopeptide_repeat 477 525
IPR002885 Pentatricopeptide_repeat 255 285
IPR002885 Pentatricopeptide_repeat 653 677
IPR002885 Pentatricopeptide_repeat 227 254
IPR002885 Pentatricopeptide_repeat 286 316
No external refs found!