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Gb_36347


Description : Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana (sp|b3h4p1|pp450_arath : 479.0)


Gene families : OG0005160 (Archaeplastida) Phylogenetic Tree(s): OG0005160_tree ,
OG_05_0003716 (LandPlants) Phylogenetic Tree(s): OG_05_0003716_tree ,
OG_06_0009734 (SeedPlants) Phylogenetic Tree(s): OG_06_0009734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36347
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 Archaeplastida
MA_77707g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 243
IPR002885 Pentatricopeptide_repeat 570 617
IPR002885 Pentatricopeptide_repeat 269 297
IPR002885 Pentatricopeptide_repeat 156 183
IPR002885 Pentatricopeptide_repeat 454 514
No external refs found!