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  5. Gb_36354

Gb_36354


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0013186 (SeedPlants) Phylogenetic Tree(s): OG_06_0013186_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36354
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014236001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01021167001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Gb_38379 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e022442_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 227 291
No external refs found!