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  5. Gb_36638

Gb_36638


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 88.6)


Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36638
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Gb_01443 No alias no hits & (original description: none) 0.24 Archaeplastida
Gb_02905 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_03950 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 Archaeplastida
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_04925 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_08180 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 Archaeplastida
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_19120 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_21087 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_21357 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_23888 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_25019 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_25155 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_25845 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_26530 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_26646 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_29132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_29291 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_31767 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.24 Archaeplastida
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_33153 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_34479 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_34971 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_39849 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.13 Archaeplastida
Gb_40931 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_41260 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.21 Archaeplastida
Gb_41711 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!